PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_12314g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ZF-HD
Protein Properties Length: 89aa    MW: 9720.77 Da    PI: 6.9908
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_12314g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.31.8e-332279260
    ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                   ++vrY eC+kNhAas+Gg+avDGCgEfm+s geegtaaalkCaAC+CHR+FHRre e+e
  MA_12314g0010 22 KGVRYGECQKNHAASIGGYAVDGCGEFMAS-GEEGTAAALKCAACNCHRSFHRREIENE 79
                   579**************************9.999*********************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257746.0E-242289IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.1E-312476IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015664.4E-292576IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.7512675IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MRPSEMQHTE DSRRGVDASL RKGVRYGECQ KNHAASIGGY AVDGCGEFMA SGEEGTAAAL  60
KCAACNCHRS FHRREIENET LCECHRTGS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1010401e-144BT101040.1 Picea glauca clone GQ0065_E22 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931461.19e-33PREDICTED: mini zinc finger protein 1-like
SwissprotQ9LJW54e-32MIF2_ARATH; Mini zinc finger protein 2
TrEMBLA9NYD89e-42A9NYD8_PICSI; Putative uncharacterized protein
STRINGVIT_14s0108g00760.t013e-31(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9116237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-33mini zinc finger 2